March 2019

20 - 22
Friedrich @ the KNIME Spring Summit 2019 in Berlin.
Friedrich presented a poster about how to use KNIME and open-source hardware to build a behavioral tracker for C. elegans.

February 2019

04 - 15
Laura @ the EMBO Practical Course Methods for studying phase separation in biology at Max Planck Institute of Molecular Cell Biology and Genetics in Dresden.

January 2019

01 - 29
Laura @ the lab of Sevinc Ercan at NYU for a collaboration visit.

December 2018

08 - 12
Stephan, Ella and Marwan @ From Images to Knowledge with ImageJ & Friends in Heidelberg.
Stephan gave an invited talk about bigStitcher, Ella gave a short talk, and Klim presented a poster.

October 2018

29 - 31
Ella @ EMBL Machine Learning for Image Analysis in Heidelberg.

08 - 12
Friedrich @ The Francis Crick Institute in London.
Friedrich presented his work during a talk and collaborated with the Making Lab to produce custom microfluidic chips for his project.

September 2018

27 - 29
Marwan and Friedrich @ MDC PhD Retreat in Döllnsee–Schorfheide.
Marwan and Friedrich presented posters summarizing their work. Marwan’s poster on the BigStitcher won the first prize!

August 2018

25 - 28
Laura @ EMBL Transcription and Chromatin in Heidelberg.
Poster presentation on transcription regulation in the context of dosage compensation in C. elegans.

July 2018

30 June - 08
Friedrich @ 3D developmental imaging EMBO practical course at the Instituto Gulbenkian de Ciência in Oeiras, Portugal.

June 2018

13 - 17
Friedrich @ C. elegans development, cell biology and gene expression in Barcelona, Spain.
Poster on characterizing mechanisms of neuronal plasticity in the dauer-exiting C. elegans larva.

May 2018

Microscopy club meeting about co-localization analysis of fluorescence images.

Laura @ Nuclear Organization & Function conference in Cold Spring Harbor.
Poster presentation on transcription regulation in the context of dosage compensation in C. elegans.

01 - 30
Laura @ the lab of Sevinc Ercan at NYU for a collaboration visit.

March 2018

26 – 28
Dhana and Laura @ SignGene Winter School on Chromatin & Gene Expression in Israel.
Dhana and Laura presented their work.

12 – 14
The whole lab went to a lab retreat in Sintra, Portugal. 
We discussed our work and had great talks by our guests Bruno Costa-Silva and Gaby Martins.

01 – 03
Dhana and Laura @BIOTEC Forum 2018 - Biophysics of the Nucleus in Dresden. 
Dhana and Laura presented their work.

January 2018

31 – 01 Feb
Klim, Ella, and Marwan @ NEUBIAS conference in Szeged, Hungary.
Klim and Ella presented their work.

04 – 06
Dhana @ Quantitative Bioimaging Meeting in Göttingen.

December 2017

03 – 16
Klim and Marwan @ MPI-CBG Hackathon in Dresden.
Klim is working on the integration of the Radial Symmetry node into KNIME. Marwan is joining the Fiji dev community.

November 2017

10 – 15
Stephan and Nikita @ Society for Neuroscience Meeting (SFN) in Washington, DC.

07
Dhana and Friedrich @ Future Medicine 21017 in Berlin #futuremed17. 

02 - 08 Dec
Laura @ the lab of Sevinc Ercan at NYU for a collaboration visit.

October 2017

4 – 7
Dhana @ Seeing is Believing at EMBL Heidelberg #eesimaging.

September 2017

20 – 29
Klim @ Hackathon at KNIME in Konstanz.
Klim is working on the updated version of the Radial Symmetry plugin and applying neural networks to the detection problems.

14 – 16
Dhana, Ella, Klim and Laura @ MDC/FMP Phd Retreat in Schorfheide.
Laura and Klim helped to organise this years retreat.

August 2017

22 – 25
Klim @ Deep Learning Bootcamp 2017 in Dresden.
Poster on the computational approach for studying the transcription regulation in C. elegans.

July 2017

05 – 07
Dhana @ Systems Biology of Human Disease Conference in Heidelberg.
Dhana will give a short talk on p53 dynamics and stochastic gene expression in the DNA damage response.

June 2017

21 – 25
Stephan, Laura & Ella @ International C. elegans Conference in LA.
Ella will give a short talk and Laura will present a poster.

18 – 21
Dhana @ IMB Conference: Gene Regulation by the numbers at the IMB in Mainz, Germany.
Poster on quantitaive imaging of transcriptional regulation by p53 in the DNA damage response.

14 – 17
Stephan @ Light Sheet Fluorescence Microscopy International Conference in Singapore.
Invited Speaker

13 – 16
Laura @ Second international meeting on SMC proteins in Yamagata, Japan.
Poster presentation on role of chromosome condensation on RNA Pol II and transcription.

06 – 08
Stephan, Laura, Dhana & Ella @ Berlin Summer Meeting 2017 - Imaging Gene Regulation from DNA to RNA to Protein, #BSM2017 in Berlin.

April 2017

09 – 12
Stephan, Nikita & David @ Focus on Microscopy in Bordeaux, France.
Presentation: Big Stitcher - Efficient Alignment of Multi-Tile and Multi-View Lightsheet Data of Cleared Samples

March 2017

22 – 24
Stephan, Nikita & Klim @ Symposium on Microscopy Imaging: From Molecules to Organisms in Jena, Germany.
Presentation: Image Reconstruction and Application to Whole-Organism Transcription Imaging

05 – 07
Dhana @ SignGene Winter School in Eilat, Israel.
Dhana is one of the main organizers of this year’s Winter School of the german israeli graduate school SignGene. Invited international speakers will hold workshops ranging from proteomics to single cell techniques.

February 2017

01 – 03
Stephan & David @ NEUBIAS2020 Syposium in Lisbon, Portugal.
Presentation by Stephan: Reconstruction of Large Tiled Image Acquisitions using ImgLib2 and BigDataViewer
David presented the BigStitcher at the Open Software Lounge

26 – 03
Dhana @ CSHL Conference: Global regulation of Gene Expression in Cold Spring Harbor Laboratory.
Poster on p53 single cell dynamics and their influence on target gene expression.

January 2017

27 – 29
Klim @ Zeiss Hackathon in Jena.

08 – 13
Klim & Ella @ Computer Science & Engineering Computer Vision School CSE at the Hebrew University in Jerusalem, Israel.

December 2016

05 – 16
Klim @ MPI-CBG Hackathon hackDD16 in Dresden.

02
Stephan @ 9th Annual NYU Developmental Genetics Symposium in New York, USA.
Invited Presentation: Image Reconstruction and Application to Whole-Organism Transcription Imaging

November 2016

14 - 18
The Preibisch and Woehler lab organized the first EU-Life Course on Biological Image Reconstruction and Analysis at the MDC Berlin, Germany.
25 selected international students experienced a week full of exciting presentations and hands-on workshops by internationally renowned experts in the field of image analysis.

October 2016

03
Laura @ The New York Academy of Sciences Genome Integrity Discussion Group in New York.

September 2016

22 – 25
Stephan, Ella, Klim and Dhana @ MDC/FMP Phd Retreat in Schorfheide.

13 – 17
Laura @ CSH Epigenetics & Chromatin conference in Cold Spring Harbor.
Poster presentation on role of chromosome condensation on RNA Pol II and transcription.

09 – 11 Oct
Laura @ the lab of Sevinc Ercan at NYU for a collaboration visit.

01 – 06
Dhana @ SignGene Symposium in Potsdam, Germany.
Short Talk and Poster presentation about p53 dependent gene expression.

August 2016

31 – 2 Sep
Stephan @ 3rd Light Sheet Fluorescence Microscopy International Conference at the University Sheffield in Sheffield, UK.
Presentation and hands-on course on the reconstruction of multiview lightsheet data.

22 – 27
Varun and Klim @ Vision and Sports Summer School in Prague, Czech Republic.

17 – 19
Stephan @ EMBO Practical Course “Lightsheet microscopy” at the MPI-CBG in Dresden, Germany.
Presentation and hands-on course on the reconstruction of multiview lightsheet data.

01 – 06
Ella @ Medical Imaging Summer School (MISS) in Sicily, Italy.

July 2016

17 – 22
Varun @ International Computer Vision Summer School in Sicily, Italy.

06 – 08
Stephan @ EMBO Practical Course “3D developmental imaging” at the Gulbenkian Institute in Oeiras, Portugal.
Presentation and hands-on course on the reconstruction of multiview lightsheet data.

June 2016

27 – 30
Stephan and Ella @ the Mouse Development Workshop in Janelia, USA.
Stephan gave a talk and a workshop and Ella presented her work in a poster.

13 – 17
Dhana @ Systems Biology of Human Disease (SBHD) Conference at Harvard Medical School in Cambridge/Boston, USA.
Poster presentation on p53 signaling dynamics and stochastic gene expression.

06 – 10
Stephan @ EU-Life Meeting at FAPESP in São Paulo, Brazil.

01 – 03
We all were @ the MDC hosted the European Worm Meeting.
Ella presented her work in a poster “Active Contour based Segmentation of C. elegans Electron Microscopy Data”.

April 2016

07 – 08
Stephan @ the BioImaging Symposium of the LMU Munich, Germany.


March 2016

14 – 16
Laura @ International Meeting of the the German Society for Cell Biology (DGZ) in Munich, Germany.

10 – 12
Laura @ Chromatin Dynamics Symposium in Munich, Germany.

Feb 27 – Mar 05
Dhana @ SysBio2016 - Advanced Lecture Course on Systems Biology in Innsbruck, Austria.
Poster presentation about experimental and mathematical approaches to correlate transcription factor dynamics and stochastic gene expression.

February 2016

15 – 18
Stephan @ Genshagener Kreis at Schloss Genshagen, Berlin, Germany.

14 – 17
Dhana @ SignGene Winter School in Haifa, Israel.
Talk about “Building the bridge: From p53 dynamics to stochatic gene expression”.

02 – 03
Stephan @ Molecular Biology of the Cell Course at the Institute Pasteur in Paris, France.

January 2016

18 – 22
Laura @ FranceBioimaging Advanced Training (FBIAT) microscopy workshop in Montpellier, France.

December 2015

01 – 05
Laura and Stephan @ the annual BIMSB-NYU retreat in New York, USA.

November 2015

22 – 24
Stephan @ Bioimage Informatics Meeting in Paris, France.

09 – 10
Stephan @ Biochemistry Department in Oxford, UK.

October 2015

29 – 30
Stephan @ the ETH Zürich in Switzerland.
with a talk about lightsheet microscopy reconstruction.

14 – 16
Stephan @ Bioimage Informatics Conference 2015 of the NIST in Gaithersburg, MD, USA.
with his talk about the work on lightsheet microscopy reconstruction and the BigDataViewer.

6 – 7
Stephan @ the annual BIMSB-MRC retreat in Berlin, Germany.

September 2015

9 – 11
Stephan @ the BIMSB retreat in Lindow, Germany.

July 2015

12 – 15
Stephan @ the HFSP Meeting Awardee Meeting at the Salk Institute in San Diego, CA, USA.

June 2015

29 – 3
Stephan organized a Hackathon at the BIMSB/MDC in Berlin, Germany.
The focus of the hackathon was to adapt the Multiview Reconstruction software so it is easier to call it externaly and to introduce more programmers into the general layout and functionality of the software.